Half day modules ResponsibleHeiko Schmidt and Nidia Trovao TIME CONTENT SPEAKERS Friday August 9: Morning Module 1: Large phylogenies - Responsible Heiko Schmidt 8:30 to 9:30 Fast methods for large phylogenies. H. Schmidt 9:30 to 10:15 Large phylogenies: practice H. Schmidt 10:15 to 10:45 Coffee break. 10:45 to 11:45 Partition of large phylogenetic trees H. Schmidt 11:45 to 12:30 Cluster analysis: practice. H. Schmidt 12:30 to 13:30 Lunch. Module 2: Molecular adaptation - Responsible Sergei Pond 8:30 to 10:30 Molecular adaptation: theory A. Lucaci 10:30 to 10:45 Coffee break. 10:45 to 12:30 Molecular adaptation: practice (HYPHY) A. Lucaci, D. Martin 12:30 to 13:30 Lunch. Module 3: Biological Fundamentals of Mechanistic and Phylogenetic Modelling - Responsible José Lourenço 8:30 to 9:30 Epidemiological models: back to basics. J. Lourenço, F. Pinotti 9:30 to 10:30 Epidemiological models: practice. J. Lourenço, F. Pinotti 10:30 to 10:45 Coffee break. 10:45 to 12:30 Epidemiological dynamics with phylogenetic inference: practice. J. Lourenço, F. Pinotti 12:30 to 13:30 Lunch. Friday August 9: Afternoon Module 5: Visualization Of Large Phylogenies With Metadata - Responsible Níidia Trovão 13:30 to 14:30 Visualization of large phylogenies with metadata: an introduction N. Trovão 14:30 to 15:30 Visualization and annotation of phylogenetic trees using ggtree. T. Lam 15:30 to 16:00 Coffee break. 16:00 to 17:30 Real-time tracking of pathogen evolution using Nextstrain J. Chang Module 6: Recombination and networks - Responsible Darren Martin 13:30 to 14:30 Detecting Recombination: theory. D. Martin 14:30 to 15:30 Detecting Recombination: practical computer session. D. Martin 15:30 to 16:00 Coffee break. 16:00 to 17:30 Advanced recombination detection and networks: practice. D. Martin